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Thursday, September 27, 2012

Fall Colors ... Genetics test tomorrow ...


Rained this afternoon but was able to do some hive maintenance and clean up around the barn ... sun came out during the late afternoon.  Just as the fall wildflowers are winding down blooming, the trees are starting to turn color.  The clover and vetch foreground are still blooming as the deer come to graze each afternoon and morning.

At school today ... 

We reviewed in Genetics this morning for our second test of the year tomorrow.  

I had several students making up their earth science test today in selected topics in science.  We did get started on our astronomy unit / solar system modeling lab.  We will work on astronomy tomorrow ... making our models and designing a space truck for travel in the solar system ... a fun activity before taking off for fall break.

In computer programming, we are checking array problems tomorrow.  Today most students finished up their address program.  Graphics and programmed animation after fall break.

Wednesday, September 26, 2012

Fall Break closing in ...

Today in Computer Programming, we started an address program that will generate mailing labels.  This program is menu driven and has some sorting ability.  This is our last program before going on to graphics and programmed animation.  We will return to arrays and sorting later in October.

In Selected Topics, we took our Earth Science Test.  We had ten students out of class today so will have to tread water to get them caught up tomorrow.  We will also start on our solar system modeling lab.

Our genetics class finished their paper plasmid lab today.  Review for our test over Ricki Lewis Chapters 4-6, plasmid mapping, Chi Square Analysis and linkage maps tomorrow.  Our second test is on Friday.

This evening on the farm, I walked on grass and vetch seed where we had corn and it may erode ... until dark with bats flying overhead.

Tuesday, September 25, 2012

Paper Plasmid Lab,Turnip Greens and Milkweed Pods

In Genetics today, we started our paper plasmid lab.  Students constructed a paper plasmid and some eukaryotic DNA with a gene of interest.  They then marked the cutting sites for eight restriction enzymes.  Tomorrow we will cut out the gene of interest and insert it in our plasmid.  Discussion to follow ...

Selected Topics reviewed for our earth science test tomorrow and started our unit on astronomy with a discussion on star life cycle.  After our unit exam tomorrow we will continue for a few days in astronomy ... HR Diagrams, Deep Space, the solar system and more.

Computer science students finished their gradebook problem.  We will do our address labeling program tomorrow before checking problems and heading to fall break.  Graphics and animation after fall break.

I have a weak hive I checked today and will have to combine with another hive tomorrow.  Also, picked some turnip/mustard greens for Sue Neal.  Just before dark I harvested some milkweed pods for a project I want to do in class.  Several had opened already but I was able to harvest about 20 pods ... picture below is from Monarch Watch ... www.monarchwatch.org  

I am still seeing some monarch butterflies when I am outside in the evenings.

Image


"Harvesting Milkweed Seeds" article
http://www.monarchwatch.org/update/2003/1024.html#10

"Harvest and Storage of Milkweed Seeds" article
http://www.monarchwatch.org/update/2005/0728.html#7
 

Monday, September 24, 2012

Plasmid Mapping and Arrays for all!

In Genetics today we continued our work on analyzing gels.  Today's task was to measure the DNA fragments bands on a gel to calculate their size in basepairs.  After these measurements, graphing the standard and extrapolation of fragment sizes from the standard (lambda cut with HindIII), we made a map of the cutting sites.  We also worked on previous AP mapping questions and our Chapter 6 discussion questions.  Tomorrow we will start our paper plasmid lab.

One of the plasmids we are looking at tomorrow is pBR322 ... shown below:

Structure of E.coli plasmid cloning vector pBR322

http://www.chemistrylearning.com/cloning-vector/

Selected Topics finished 7 days of weather, worked on plate tectonics and major events in geologic time.  Tomorrow is review day and the our earth science test will be Wednesday.

We assigned three single dimension array problems for this week in Computer Science ... Little League II, A gradebook program and a program to make address labels.  This will take almost all week.  After fall break, we return and spend some time doing graphics.

On the farm ... Rex shelled our corn today ... a tough year for all farmers.  My worse year farming ... 1981, we didn't start planting until late June and switched everything to soybeans after it rained all spring. A wet year and low commodity prices ... it was a nightmare!  Best part of 1981 ... our daughter was born!  I knew after that year, I didn't want to be held hostage by the weather and a few years later started teaching.


Sunday, September 23, 2012

Fall Break in One Week ... and Turkey Pict!

In Genetics Friday, we worked on plasmid mapping problems.  More mapping on Monday and Chapter 6 ... morning quiz and X-linked problem review ...  Unit test on Friday before fall break, sorry!

Selected Topics will wrap up Earth Science tomorrow, Earth Science test on Tuesday.  We will start astronomy and have our solar system modeling lab next week before heading out to fall break.

Computer programming has moved into arrays and we will program solutions to three or four problems before fall break.  After break, we will take a break and do some graphic programming and programmed animation.

Last week for homecoming, we had dress like a teacher day ... below are two students that want to take mine and Mr. Byrn's jobs ... Nice protest white shirt (which on a rare occasion last week, I failed to wear!).  The future of the science department is good to go!







Thursday, September 20, 2012

PLAN and Map Reading

We did not have Genetics class today since taking the PLAN test with sophomores took up the first two blocks before lunch.  Tomorrow ... reading gels and mapping plasmids.

Selected Topics did map reading of Kentucky (distance between selected cities and national parks ... Black Mountain and more) while several students took makeup exams.  It is no surprise that most students in the class had never seen a road map of Kentucky let alone read directions on one ...

Selected Topics will start single dimension arrays tomorrow as we start a new set of problems.  We have programming graphics and animation programming on the agenda after fall break.

Below are some picts from Selected Topics and map reading today.




Wednesday, September 19, 2012

Buckeye butterfly and PLAN ... go sophomores!

We had a regular day today ... first day this week for Genetics.  We finished our Chapter 5 discussion questions after a linkage problem.  At the end of class we went over how to read a gel and tried a DNA Restriction Enzyme Mapping problem ... more of these on Friday.

Selected Topics finished the Rock Lab (Chattanooga Shale, Crinoid fossils and density testing among other stations). Seven Days of Weather continued and we worked on interpretation of rock layers.  Tomorrow we will begin to wrap up earth science with a study of plate tectonics and a short map reading lab.

Still checking qBASIC problems in computer programming ... tomorrow is the last day for this problem set before moving on to building and using single and 2-D arrays.

I started going through our beehives this afternoon, putting in Apiguard for varroa mites.  Apiguard is a thymol based miticide and is the mildest of treatments available.  Also took a walk near dark.

When I got home, I checked to see if Sue Neal had picked up the mail ... in the driveway was several butterflies near what appeared to be maybe deer excrement.  Most flew away but I was able to get one picture of a buckeye butterfly (Junonia coenia)  with a summer azure (Celastrina neglecta) just to the left of the Buckeye's head.


Tuesday, September 18, 2012

White Turtle Head and Milkweed Tussock Caterpillars!

We continued on our PLAN testing today first block with the sophomores filling out vocational information items in their answer booklets.

Selected Topics worked on 7 Days of Weather, Rock Cycle, Allen County Geology and we started our Rock Lab which will end tomorrow.

We started checking our intermediate level qBASIC programs today in Computer Programming.  Four students demonstrated their Countries/Capitals program using Read/Data statements.  One of the four stumped me with their program ... We will continue to check programs tomorrow.

I got home in time to take a walk.  Full sun after a rainy cloudy morning.  I was checking milkweed pods for harvesting and ran into a couple of dozen Tussock Caterpillar larva busy eating.  They had already stripped a couple of plants of leaves.  The black and orange larva were about two inches long.  I thought the information below about moths are protected from bats with cardiac glycoside concentrations was interesting!



From Wikipedia ...
Euchaetes egle, the Milkweed Tussock Caterpillar or Milkweed Tiger Moth, is a moth in the family Arctiidae. It is a common mid- through late-summer feeder on milkweeds and dogbane. Like most species in this family, it has chemical defenses it acquires from its host plants, in this case, cardiac glycosides (Weller et al., 1999). These are retained in adults and deter bats, and presumably other predators, from feeding on them (Hristov and Conner 2005). Only very high cardiac glycoside concentrations deterred bats, however (Hristov and Conner 2005). Adults indicate their unpalatability with clicks from their tymbal organs (Simmons and Conner 1996).
 
http://en.wikipedia.org/wiki/Euchaetes_egle

In the valley back of our house I found a couple of white turtle head wildflowers.  The flowers were large ... 1.5 inches or larger.





From Wikipedia - White Turtle Head - Chelone glabra is a herbaceous plant found in wetlands and riparian forests [1] of eastern North America with opposite, simple leaves, on stout, upright stems. The flowers are white, borne in late summer and early fall. It can be used as a method of birth control, as used by Abenaki people.   Its native range extends from Georgia to Newfoundland and Labrador and from Mississippi to Manitoba.[2]   It is the primary plant that the Baltimore Checkerspot Butterfly will lay its eggs on (although the butterfly to some extent will use a few other species).[3][4]

http://en.wikipedia.org/wiki/Chelone_glabra

Also, we have several small fields of wingstem in full bloom mixed with ironweed and goldenrod.  This picture is from close to Long Creek.  The honeybees were still hard at work near sunset.


Testing continues ...

PLAN testing for our sophomores continues today.  Yesterday was PLAN review day so I missed my Genetics class and planning period.  Today, we fill our PLAN forms and Genetics will miss again. The actual test is later in the week.

In Selected Topics we worked on Earth Science with an emphasis on Allen County ... Chattanooga Shale and the Oil Industry in Allen County from 1915-1920.  We have our Rock Lab today.

In Computer Programming, we went over a simple basketball stat program on the board in my science room and worked through several other problems individually.  The server went down at the end of the block which caught several students without their programs saved ... a lesson learned.

I worked on our new lesson plan format most of the evening and our new AP Bio course syllabus ... more paper!

Rained all day yesterday and most of last night which is good for our Uncle Burl's Turnip Green patch.

Sunday, September 16, 2012

PLAN test this week ...

This week we will be administering the PLAN - ACT for sophomores.  Students in the other grades will be practicing their ACT and our seniors will be doing superlatives and etc.

From the PLAN website ...


The PLAN® program helps 10th graders build a solid foundation for future academic and career success and provides information needed to address school districts' high-priority issues. It is a comprehensive guidance resource that helps students measure their current academic development, explore career/training options, and make plans for the remaining years of high school and post-graduation years.

PLAN can help all students—those who are college-bound as well as those who are likely to enter the workforce directly after high school.

PLAN serves as the midpoint measure of academic progress in ACT's College and Career Readiness System.


http://www.act.org/plan/

Selected Topics will meet each day third block and we will continue our study of earth science ... weather, soils, plate tectonics and more.

Computer Science will be finishing their first intermediate level qBASIC programs ... we will start checking them on Wednesday.

Turnip green patch should be ready by next Saturday and what about those Hilltoppers ... nice win and a gutsy last play to win ... Wow!

Thursday, September 13, 2012

Linkage problems and moving to Earth Science ...

In Genetics today, we finished our Logal simulation lab (picts below).  Also, we went over the Chapter 4 discussion question, mostly Mendelian genetics and demonstrated a linkage problem / sex-linked trait.  Tomorrow more linkage problems and discussion questions from Chapter 5.

Logal (old version, mystery individuals) showing the pedigree symbol simulation.


Josh leads a merger group ... finishing up the Logal Lab.


In Selected Topics, we reviewed for our Genetics / Evolution test tomorrow.  We will also start our weather unit.

We finished up checking our first six qBASIC problems today in computer programming ... most students still working on their country and capitals program for a fifth grade class.

Mowed some when I got home and took a walk to Long Creek and back ... fall flowers are at peak bloom ... it was beautiful ... big patches of yellows, blues, purples and white.

Next week is a testing week (PLAN test) so we will be missing first block, Genetics three days.



Wednesday, September 12, 2012

Logal, Population Genetics and more programming ...

Don't forget the PSAT is coming up next month ... sign up!

Mystery Individuals simulations were the agenda of the day in Genetics.  In four simulations, students were given a breeding pair of ... butterflies, rabbits, Drosophila and pedigree symbols.  Students had to identify the genetic trait or traits then, determine the mode of inheritance, giving proof with data collected by genetics crosses.  We will finish this lab and work on our Chapter 4 discussion questions and linkage problems.

In Selected Topics in Science, we finished our population genetics lab today with class room simulations, one with selection and the other demonstrating the founder's effect.  We will start our review of evolution and genetics tomorrow.

Computer Science worked on their assigned problems ... most students worked on a baseball problem that sorts batters batting over .300 and calculates the team's batting average using a READ/DATA statement.  Most students will be working on a Countries and Capitals problem tomorrow.

We had a testing PD after school until 5:00 so, was late getting home.

We do not have AP Biology until after Christmas but I am working on the 13 revised labs and the new curriculum that removes 18 chapters from our Campbell book.  Out of the AP curriculum and not covered or tested starting this year is digestive system, circulatory system, most of the nervous system, waste removal / osmoregulation, most plant biology, chemistry before water, invertebrates/vertebrates and several parts of other chapters ... emphasis is on depth and inquiry.

I had hoped the college board would divide AP biology into an A and B course with the A course going up through evolution and the B course covering plants, animals and organ systems.  Much like a two semester course in college.  Did not happen.

For more information about the AP Biology course changes see link below:

http://www.collegeboard.com/student/testing/ap/sub_bio.html

Tuesday, September 11, 2012

Great Blue Lobelia and a thistle with wild hair!

Today was club schedule day at AC-S.  My first block had nearly all students at club meetings ... something to put on that resume!  Well maybe ...

So our Logal lab in Genetics was moved to tomorrow ... modes of inheritance.

We had our third block class ... Selected Topics in Science.  We had a classroom discussion about Darwin, natural/artificial selection, evolution and the flu virus.  After this, we started our population lab in which students mate for 5 generations and we record how the gene frequency change over time when there is no selection ... tomorrow we will run the simulation again with selection and simulate a founder's effect.

We had several students out of computer programming fourth block but worked on our assigned problems with the students that were still in class.  Tomorrow, we will shift back into high gear.

Fall wildflowers are beautiful and nearing full bloom.  In the spring fed stream (which during the drought this summer did not go dry) in a narrow valley about a quarter of a mile behind our house, there are several great blue lobelia plants ... below.


There is a lot of jewelweed in this valley and a hummingbird couple that I see on nearly each walk I take.


Our second crop of buckwheat is starting to bloom.  I mixed in sunflowers which are just below the tops of the buckwheat and so far the deer have ignored them ... maybe they will bloom.


 
Lots of thistle blooming also ... when they start blooming it looks like a head with wild pink hair!

Monday, September 10, 2012

Question Mark Butterfly and Maypop pods

Monday Day ...

In Genetics today, we worked on pedigrees.  Tomorrow begins our Logal Simulation Lab ... modes of inheritance in which students discover the mode of inheritance when two organisms and their progeny are crossed.

Selected Topics in Science did a lab on separation science.  We discussed all the ways you can separate molecules in a mixture ... centrifugation, electrophoresis, filtering, distillation and chromatography.  Today's lab had a forensic theme and involve separating the different mixtures of ink found in black ink using water as our solvent ... a paper chromatography lab.  It was fun and took the entire block.  Tomorrow we move on to evolution.

In Computer Science we started to work on using the following commands ... TAB( ), SPC ( ), FOR/NEXT and READ/DATA.  We have several problems to practice these new commands.


Took a walk after school and took lots of pictures.  Today was sunny and not too hot.  There were lots of bees and butterflies out in the fall wildflowers (wingstem, ironweed, mist flower, jewelweed, snakeroot and lots of goldenrod.  Our second crop buckwheat is also blooming so we are in the middle of a fall nectar flow.  Below, I was able to get a couple of pictures of a question mark butterfly ... an angelwing ... it looked like a dead leaf on the wingstem it was hiding on.  I rotated the picture to see the butterfly better.



We have acres of wingstem on this farm and it is in full bloom.  The bees ... honeybees and bumblebees were collecting nectar this afternoon.




Also, took some pictures of the passionflower (maypop) seed pods.  They are about the size of a very large egg.  The pods are edible.




























Sunday, September 9, 2012

Bowl and Doily Spiders

In Genetics Friday, we worked on story problems for Mendelian genetics.  We will wrap this up on Monday with some time spent on pedigrees.  Logal Lab on Tuesday - Modes of Inheritance.

Selected Topics finished some projects on Friday ... our book, The Man Who Planted Trees and some genetics review.  We have a lab on chromatography tomorrow.

In computer programming, we started checking our first qBASIC problems which will continue on Monday.  We will start using For/Next statements and READ/DATA statements this week.

Busy weekend on the farm ... took a walk before church early this morning at sunrise.   Lots of spider webs covered with dew.  Hundreds of bowl and doily spider webs in the grass ... a small spider, Frotinella sp. , 2-4 mm ... didn't have my camera but I am not sure I could have taken one with my point and shoot.  Their webs are like a bowl or small cup (about the size of a cupped hand) with a layer of web underneath.  The spiders have a black and white abdomen and are very small ... Information below is from Samford University and the University of Kentucky College of Agriculture website ...



Frontinella pyramitela -- Bowl and Doily web

Invertebrate Field Zoology, Samford University
Frontinella pyramitela -- Bowl and Doily (web)
Samford University Campus, 11/2/04

http://www4.samford.edu/schools/artsci/biology/invert04f/pages/7.htm

Frontinella pyramitela
GENUS and SPECIES: Frontinella pyramitela
These spiders are commonly called “bowl and doily spiders” and build neatly crafted webs. The webs consist of a bowl-shaped cup and underneath this is a flat, typically horizontal sheet. Sometimes above the bowl it weaves a maze of tangled web. Insects fall into this bowl and it captures its prey by pulling it through the flat sheet below. You can find this spider usually in coniferous woods on lower branches or in bushes and tall grass. This species is active in spring through mid summer. Some interesting facts about this species is that adult males and females will usually share the same web as a pair. Frontinella spiderlings are also known for their ballooning capabilities – going great distances and elevations.

http://www.uky.edu/Ag/CritterFiles/casefile/spiders/sheet/sheet.htm#fpyramitela

Thursday, September 6, 2012

Chi Square Analysis today ... NMSQT

In Genetics, we finished our Indian Corn Dihybrid Cross Lab with Chi Square analysis of data.  We worked through some sample problems before applying this analysis to our Indian Corn data.  Tomorrow, more Mendelian genetics and pedigree construction.

Selected Topics in Science worked on creating a story from a pedigree ... this took most of the block.  Tomorrow we will be wrapping up our study of genetics.

Computer Programming students are working on creating a multiple choice program on states and capitals for a fifth grader ... ten questions and the program must keep score of correct anwers.  We check our first few qBASIC problems tomorrow in class.

PSAT

PSAT / NMSQT ... This preliminary SAT test is used to select National Merit Scholars ... IMO the most prestigous award you can win at our high school.  We have had only had thirteen National Merit Award winners since I have been teaching at ACS ... as compared to about 30 a year at Dupont Manual.  Our best freshmen and sophomores should take this test in preparation for their junior year when the test counts.  Practice is important!

Test date is October 17th and costs $14.

From the college board website ...

The PSAT/NMSQT measures:
  • Critical reading skills
  • Math problem-solving skills
  • Writing skills
You have developed these skills over many years, both in and out of school. This test doesn't require you to recall specific facts from your classes.
The most common reasons for taking the PSAT/NMSQT are to:
  • Receive feedback on your strengths and weaknesses on skills necessary for college study. You can then focus your preparation on those areas that could most benefit from additional study or practice.
  • See how your performance on an admissions test might compare with that of others applying to college.
  • Enter the competition for scholarships from NMSC (grade 11).
  • Help prepare for the SAT. You can become familiar with the kinds of questions and the exact directions you will see on the SAT.
  • Receive information from colleges when you check "yes" to Student Search Service.
http://www.collegeboard.com/student/testing/psat/about.html?print=true

PSAT

Wednesday, September 5, 2012

Indian Corn Lab and a sunflower!

In Genetics this morning, after some Mendelian genetic review, we started our Indian Corn Dihybrid cross lab.  Studying ears of Indian Corn with two characteristics ... purple (dominant) and yellow kernels with starchy dominant over sugary (wrinkled) kernals.  For each ear, we tried to determine the phenotypic ratio and the parent cross that produced the kernels. Tomorrow, we will run a Chi Square analysis of our results to determine the validity of the data.

The Selected Topics class worked on the same lab but a different version.  We will analyze group data tomorrow and start to wrap up our study of genetics with a survey of human diseases and conditions.

Today was our second day of programming in Microsoft qBASIC.  We are already working on if-then and if-then-else statements in addition to counters and For/Next looping statements.

After school, we got a good rain of about an inch ... great on our Uncle Burl Broughton Turnip patch.  The turnips have already germinated and the biggest plants are about the size of a quarter.  Also, before the rain took a picture of one of our best sunflowers.  Website below shows the fibonacci number of the seed patterns ...

http://momath.org/home/fibonacci-numbers-of-sunflower-seed-spirals/




Tuesday, September 4, 2012

Meiosis, Genetics and on to qBASIC

In Genetics this morning after a long weekend, we went over our discussion questions for Chapter 3.  Discussion topics included embryo development, the three primitive germ layers, teratogens and progeria.  We also started our study of Mendelian genetics ... which will continue tomorrow with our Indian corn dihybrid cross lab.

In Selected Topics of Science, we worked in the Rick Lewis book ... several topics and several genetic conditions.  We will finish this tomorrow.  We will try to wrap up our study of genetics this week with a genetics lab and a chromatography lab.

We started Microsoft qBASIC in Computer Programming today.  We went over programming essentials in small groups of 4 and 5.  This instruction took the entire block.  We will start our problems in qBASIC tomorrow and will be working in qBASIC for several weeks before moving on to Microsoft Visual BASIC.

http://en.wikipedia.org/wiki/QuickBASIC

Yesterday, I had a picture of a vine I was trying to ID ... turns out to be a burr cucumber vine, an invasive.

We have a garden spider working at the corner of our porch ... I have seen several during the summer. My pictures of our porch spider in not very good ... will try again later




The web of the yellow garden spider is distinctive: a circular shape up to 2 feet (60 cm) in diameter, with a dense zigzag of silk, known as a stabilimentum, in the center. The purpose of the stabilimentum is disputed. It is possible that it acts as camouflage for the spider lurking in the web's center, but it may also attract insect prey, or even warn birds of the presence of the otherwise difficult-to-see web. Only those spiders that are active during the day construct stabilimenta in their webs.

http://en.wikipedia.org/wiki/Argiope_aurantia


Monday, September 3, 2012

Labor Day over ... back to work.

In Genetics tomorrow, we will be going over topics in Chapter 3 ... meiosis and more.  Also, we will start our study of Mendelian genetics ... lots of labs on the horizon ... Indian Corn, Logal simulations and Drosophila.

Selected Topics in Science will continue their study of genetics tomorrow ... We will finish our book, The Man that Planted Trees and hand in our Comp books to be scored.

Computer Science finished Karel programming on Friday and we will start programming in Microsoft qBASIC on Monday ... a long unit using the logic we learned in Karel.  We will go for awhile with some simpler problems and stop at some point in a week or two to do a graphics unit ... including programming animation.

During the Labor Day weekend, several members of my family were at our home.  We took several walks between showers.  Below, my brother-in-law Tim, John and his wife Claire, my sister (only sibling) Kathy, me, our oldest daughter Rachel and her husband Kyle ... also Maggie, Claire's parents black lab.  Sorry ... my camera lens was foggy!  Below this picture, is a vine at the woods edge I am trying to identify.